One approach to understanding components in living organisms is to
attempt to create them artificially, using principles of chemistry,
engineering and genetics. A suite of powerful techniques—collectively
referred to as synthetic biology—have been used to produce
self-replicating molecules, artificial pathways in living systems and
organisms bearing synthetic genomes.
In a new twist, John Chaput, a researcher at Arizona
State University’s Biodesign Institute and colleagues at the Department
of Pharmacology, Midwestern University, Glendale, AZ have fabricated an
artificial protein in the laboratory and examined the surprising ways
living cells respond to it.
“If you take a protein that was created in a test
tube and put it inside a cell, does it still function,” Chaput asks.
“Does the cell recognize it? Does the cell just chew it up and spit it...
Friday, 28 December 2012
Thursday, 27 December 2012
New Data Challenge Old Views About Evolution of Early Life
A research team led by biogeochemists at the University of
California, Riverside has tested a popular hypothesis in paleo-ocean
chemistry, and proved it false.
The fossil record indicates that eukaryotes
— single-celled and multicellular organisms with more complex cellular
structures compared to prokaryotes, such as bacteria — show limited
morphological and functional diversity before 800-600 million years ago.
Many researchers attribute the delayed diversification and
proliferation of eukaryotes, which culminated in the appearance of
complex animals about 600 million years ago, to very low levels of the
trace metal zinc in seawater.
As it is for humans, zinc is essential for a wide range of basic
cellular processes. Zinc-binding proteins, primarily located in the
cell nucleus, are involved in the regulation of gene transcription.
Organic-rich shale samples, such...
Thursday, 20 December 2012
GEIC deadline extended to 31st December

GEIC
GBioFin Entrepreneurship and Innovation
Certificate
NOW IT’S YOUR TURN TO
BE THE NEXT KIRAN MAZUMDAR!!!!!!!!!!!
We come across many students who have
lots of business ideas during their graduation days, about opening their own
business and a dream of being the Boss /CEO of their own company. But with time,
these ideas get cornered and a person ends up finding a good job or takes up
higher studies etc, but very few have the courage to start...
TATA First Dot Student Start-up Award
APPEAL
We have been nominated for Tata first dot Student Start-up
Award Powered by NEN
VOTE for us (
GBioFin Biotechnology Services) at Tata first dot to BRING THE CHANGE
Get yourself registered and VOTE for Biotech.
Remember "VOTE" is different from the
"LIKE" option. So do cast your vote. AND BRING THE CHANGE
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3 Steps to Cast your VOTE :-
1)Click on the link http://tatafirstdot.com/nomination/gbiofin
2)Click on the Thumbs up Option
3)Sign Up and Like again on the FB Link (
confirmation link will be send to your email id)
4) After the Click on the confirmation link your will be able to CAST YOUR VOTE
5) After you VOTE , make sure your Vote is
registered.
- Make sure you VOTE and not just
Like
We have got 4,195 members on Facebook group. We can win this. Please vote.
Come Join Us in our Movement to BRING THE CHANGE !!!!!!!
...
CSIR UGC NET(Life Sciences)
This post is dedicated to all the NET aspirants who will be taking the test this Sunday i.e. the 23rd December 2012.
We hope you are all geared up and ready to rock the test.
CSIR NET exam is really a tough one and thousands of aspirants desire to crack it. It needs a thorough preparation which you all must be done with by now and a well planned strategy for taking the exam.
Here in this post we will be providing you some tips about CSIR UGC NET.
1. The first suggestion to all is to keep a check on the CSIR HRDG website always, even after you have taken the exam.
For instance the timings of the exams was changed as given here.
2. Try doing a lot of question papers of the previous NET exams, as many as possible. This helps in improving your speed which is a crucial factor when one is attempting the questions in very limited time.
In addition to that, it helps in preparing a strategy which you are most likely to follow in your exam to manage your time between questions (not all questions need to be attempted) and obtain the maximum efficiency and as a consequence the maximum marks.
3. Work on your strong topics very exhaustively. Since only 15/20, 35/50 and 25/75 questions need to be done, it will help you to decide the questions quickly thus saving a lot of time. In other words you should have complete knowledge of the topic you are very good at.
4. Never answer the questions randomly. Answer only if you are sure of the answer.
Sometimes categorizing the questions into 3 categories, absolutely sure ones, doubtful ones and the ones with no idea; is helpful. This way you can attempt the first category and only if the required number...
Wednesday, 19 December 2012
Designing Influenza Immunogen
Influenza HA is the primary target of neutralizing antibodies during infection, and its sequence undergoes genetic drift and shift in response to immune pressure. The receptor binding HA1 subunit of HA shows much higher sequence variability relative to the metastable, fusion-active HA2 subunit, presumably because neutralizing antibodies are primarily targeted against the former in natural infection. We have designed an HA2-based immunogen using a protein minimization approach that incorporates designed mutations to destabilize the low pH conformation of HA2. The resulting construct (HA6) was expressed in Escherichia coli and refolded from inclusion bodies. Biophysical studies and mutational analysis of the protein indicate that it is folded into the desired neutral pH conformation competent to bind the broadly neutralizing HA2 directed monoclonal 12D1, not the low pH conformation observed in previous studies. HA6 was highly immunogenic in mice and the mice were protected against lethal challenge by the homologous A/HK/68 mouse-adapted virus. An HA6-like construct from another H3 strain (A/Phil/2/82) also protected mice against A/HK/68 challenge. Regions included in HA6 are highly conserved within a subtype and are fairly well conserved within a clade. Targeting the highly conserved HA2 subunit with a bacterially produced immunogen is a vaccine strategy that may aid in pandemic preparedness.
Read the full study here.
A summary is given here.
...
Sunday, 2 December 2012
Hiyoshi Internship Program 2013
Hiyoshi Corporation, Omihachiman, Japan and ABK-AOTS DOSOKAI, Tamilnadu Centre are jointly organizing two months stipendiary International Internship Program’2013 at Japan for three students from the Engineering Colleges / Universities of India.
The students can be from Biotechnology, Environmental Science &
Chemical Engineering and they should have consistently scored 75% of marks throughout.
Preferences will be given to those students who are having knowledge in basic Japanese Language skill.
Students who are perusing Third Year of Engineering or 1st yr of post graduation can apply for this program
Terms & Conditions and Application Form for the Training at Hiyoshi Corporation, Japan is in below link.
Internship details
Application form
...
Monday, 26 November 2012
Capturing living cells in micro pyramids
Cells moving into the pyramids
A field full of pyramids, but on a micro scale. Each of the pyramids
hides a living cell. Thanks to 3D micro- and nano scale fabrication,
promising new applications can be found. One of them is applying the
micro pyramids for cell research: thanks to the open ‘walls’ of the
pyramids, the cells interact. Scientists of the research institutes
MESA+ and MIRA of the University of Twente in The Netherlands present
this new technology and first applications in Small journal of the
beginning of December.
Most of the cell studies take place in 2D: this is not a natural
situation, because cells organize themselves in another way than in the
human body. If you give the cells room to move in three dimensions, the
natural situation is approached in a better way while capturing them in
an array. This is possible in the ‘open pyramids’ fabricated in the
NanoLab...
Thursday, 15 November 2012
Solving the mystery of ageing
Why do we get older? When do we die and why? Is there a life without
ageing? For centuries, science has been fascinated by these questions.
Now researchers from Kiel (Germany) have examined why the polyp Hydra is
immortal – and unexpectedly discovered a link to ageing in humans. The
study carried out by Kiel University together with the University
Medical Center Schleswig-Holstein (UKSH) will be published this week in
the Proceedings of the National Academy of Sciences of the United States
of America (PNAS). It was funded by the German Research Foundation DFG.
Hydra – mysteriously immortal
The tiny freshwater polyp Hydra does not show any signs of ageing and is
potentially immortal. There is a rather simple biological explanation
for this: these animals exclusively reproduce by budding rather than by
mating. A prerequisite for such vegetative-only reproduction is that
each polyp...
How Do Cells Tell Time? Scientists Develop Single-Cell Imaging to Watch the Cell Clock
A new way to visualize single-cell activity in living zebrafish
embryos has allowed scientists to clarify how cells line up in the right
place at the right time to receive signals about the next phase of
their life.
Under normal circumstances in zebrafish embryos, cells oscillate in synchrony with their neighbors as they prepare to make segments that later become muscle and vertebrae. When a color map (top left corner) is used to indicate the phase of oscillation in each cell at any fixed snapshot of time, with cool colors representing the peak of the gene activation wave and warm colors the lower levels of activation, it is evident in the top image that neighboring cells are in a similar phase, or transitioning smoothly to the next phase. However, in embryos lacking a powerful messaging system called Notch signaling, that synchrony is lost. In the bottom map, cells...
GBioFin Entrepreneurship and Innovation Certificate
GBioFin proudly announces the launching of GEIC (GBioFin Entrepreneurship and Innovation Certificate).
GEIC is 3 months Online Programme started for Promoting Biotechnology and Life-Sciences with its scope in Entrepreneurship.GEIC aims to provide all the Information regarding Entrepreneurship, Innovation, Research, Intellectual Property Rights and so on.
Program Includes-
1-Online Interactive Sessions
2-Online best course material and module notes (having comparison with Cambridge and Oxford) with assignments
3- Launch of a student Educational Magazine E-Copy for GEIC enrolled Students (including Articles given as assignment for GEIC)
4-Interaction with the advisors assigned for the GEIC through email
5-GEIC Certificate will be sent at the home addresses of each candidate through post
6-Student Membership free for 1 year worth Rs.350 which includes the following:-
a) Free Access...
Tuesday, 13 November 2012
Jellyfish-inspired device that rapidly and efficiently captures cancer cells from blood samples could enable better patient monitoring
Cells traveling through a microfluidic device can be trapped
by strands
of DNA (green).
Image: Suman Bose and Chong Shen
Tumor cells circulating in a patient’s bloodstream can yield a great
deal of information on how a tumor is responding to treatment and what
drugs might be more effective against it. But first, these rare cells
have to be captured and isolated from the many other cells found in a
blood sample.
Many scientists are now working on microfluidic
devices that can isolate circulating tumor cells (CTCs), but most of
these have two major limitations: It takes too long to process a
sufficient amount of blood, and there is no good way to extract cancer
cells for analysis after their capture.
A new device from
researchers at MIT and Brigham and Women’s Hospital overcomes those
obstacles....
Sunday, 11 November 2012
First ‘snapshots’ of the electronic structure of a manganese complex related to water-splitting in photosynthesis
Together with a large international research team, Johannes Messinger of
Umeå University in Sweden has taken another step toward an
understanding of photosynthesis and developing artificial
photosynthesis. With a combination of a x-ray free-electron laser and
spectroscopy, the team has managed to see the electronic structure of a
manganese complex, a chemical compound related to how photosynthesis
splits water.
illustration of ultra-short x-ray pulse striking molecules
containing manganese. Illustration: Greg Stewart,
National Accelerator
Laboratory at Stanford
University
The experiments used the Linac Coherent Light Source (LCLS), which is
a free-electron x-ray laser facility at Stanford University in the US.
The wavelength of the laser is roughly the same as the breadth of an
atom, and each pulse of light lasts 50 femtoseconds (10-15).
This is an extremely short...
Wyss Institute Models a Human Disease in an Organ-on-a-Chip
Researchers at the Wyss Institute for Biologically Inspired
Engineering at Harvard University have mimicked pulmonary edema in a
microchip lined by living human cells, as reported today in the journal
Science Translation Medicine. They used this "lung-on-a-chip" to study
drug toxicity and identify potential new therapies to prevent this
life-threatening condition.
The study offers further proof-of-concept that human
"organs-on-chips" hold tremendous potential to replace traditional
approaches to drug discovery and development.
"Major pharmaceutical companies spend a lot of time and a huge amount
of money on cell cultures and animal testing to develop new drugs,"
says Donald Ingber, M.D., Ph.D., founding director of the Wyss Institute
and senior author of the study, "but these methods often fail to
predict the effects of these agents when they reach humans."
The lung-on-a-chip...
Friday, 9 November 2012
We are launching E-Copy of BiotechRings:edition 1

https://docs.google.com/spreadsheet/viewform?formkey=dExpdnEyZThzQnhEMGlPcEI4OUNDU2c6MQ
...
Monday, 5 November 2012
Biochemists Discover New Mechanism in Ribosome Formation
A new mechanism in the formation of ribosomes has been discovered by
researchers from the Heidelberg University Biochemistry Center. In an
interdisciplinary approach, the Heidelberg scientists, along with
colleagues from Switzerland and Japan, describe a heretofore
uncharacterised protein that plays a specific role in ribosome assembly
in eukaryotes, organisms whose cells contain a cell nucleus. This
protein makes sure that specific factors required for ribosome synthesis
are transported together, like hitchhikers, into the nucleus to the
site of assembly. The results of this research were published in
“Science”.
The figure shows the large subunit of the ribosome in its
high-resolution 3D
structure. The ribosomal RNA is depicted in grey, the
myriad of ribosomal proteins
in blue-grey. The r-protein Rpl5 is shown
in yellow, the r-protein Rpl11 in green. The
ruby-coloured area...
NYU researchers use simulations on TACC, XSEDE supercomputers to understand how some carcinogens evade removal by stabilizing the very DNA they attack
A person doesn't have to go far to find a polycyclic aromatic
hydrocarbon (PAH). These carcinogen precursors are inhaled through
automobiles exhaust during the morning commute, are present in a drag of
cigarette smoke, and are part of any barbequed meal.
Once ingested or inhaled, these big, bulky multi-ringed molecules
are converted into reactive carcinogenic compounds that can bind to DNA,
sometimes literally bending the double helix out of its normal shape,
to form areas of damage called lesions. The damaged DNA can create
errors in the genetic code during replication, which may cause
cancer-initiating mutations.
It is the job of the nuclear
excision repair (NER) system to repair damage caused by PAH lesions by
removing the segment of DNA where the lesion is bound and patching up
the resulting gap. But some lesions are especially resistant to this
repair machinery, making...
Friday, 2 November 2012
Ames Lab researchers find three unique cell-to-cell bonds
Sanjeevi Sivasankar leads a research team that uses atomic force
microscopy and other technologies to study the bonds that connect
biological cells. Photo by Bob Elbert.
The human body has more than a trillion cells, most of them connected, cell to neighboring cells.
How, exactly, do those bonds work? What happens when a pulling force is
applied to those bonds? How long before they break? Does a better
understanding of all those bonds and their responses to force have
implications for fighting disease?
Sanjeevi Sivasankar, an Iowa State assistant professor of physics and astronomy and an associate of the U.S. Department of Energy’s Ames Laboratory,
is leading a research team that’s answering those questions as it
studies the biomechanics and biophysics of the proteins that bond cells
together.
The researchers discovered three types of bonds when they subjected
common...
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