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Sunday 12 January 2014

New Technique To Understand How Genes Function Via Stem Cells

It is a speedy and comprehensive method for determining the function of genes and hence could greatly improve our understanding of a wide range of diseases and conditions, such as heart disease, liver disease and cancer.

This method uses stem cells with a single set of chromosomes, instead of the two sets found in most cells, to reveal what causes the "circuitry" of stem cells to be rewired as they begin the process of their differentiation into other cell types. In Embryonic stem cells ,there is a particular gene circuitry which retains their original, undifferentiated state,making them self-renewing.Dismantling of this circuitry is what leads to conversion of stem cells to other cell types .This process is known as cell differentiation. However, mechanism behind this process was not clearly understood.

Researchers from the University of Cambridge Welcome Trust-MRC Stem Cell Institute have developed a technique which can explain many factors which are responsible for cell differentiation, including many that were previously unknown.
Cells in mammals contain two sets of chromosomes : one is maternal while the other paternal. This can lead to many challenges in studying the function of genes, since  each cell contains two copies of each gene, determining the link between a genetic change and its physical effect, or phenotype, is immensely complex. According to Dr Martin Leeb,, who led the research, in collaboration with Professor Austin Smith, conventionally work is done gene by gene, and in the past people would have spent most of their careers looking at one mutation or one gene. Today, the process is a bit faster, but it's still a methodical gene by gene approach, especially in case of organisms with two sets of chromosome.

Embryonic stem cells with a single set of chromosomes, known as haploid stem cells were generated by Dr Leeb using unfertilized mouse eggs. These haploid cells show all of the same characteristics as stem cells with two sets of chromosomes, and retain the same full developmental potential, making them a powerful tool for determining how the genetic circuitry of mammalian development functions. Researchers have used transposons or  "jumping genes",to make mutations in nearly all genes. The effect of a mutation can be seen immediately in haploid cells because there is no second gene copy. Additionally, since embryonic stem cells can convert into almost any cell type, the haploid stem cells can be used to investigate any number of conditions in any number of cell types. Mutations with important biological effects can then rapidly be traced to individual genes by next generation DNA sequencing.

This is a revolutionary tool for unraveling how gene circuits operate and many other biological questions.